Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854687.1_cds_XP_016512645.1_25268
CDS Infomation

[gene=LOC107829692] [db_xref=GeneID:107829692] [protein=plant UBX domain-containing protein 11-like isoform X3] [protein_id=XP_016512645.1] [location=complement(join(8166..8251,11246..11506,11670..12165,12242..12448,17510..17577,17655..17720,19193..19274,19373..19425,20963..21062))] [gbkey=CDS]
Sequence

ATGGAGCGACCTTTATCTTCACTTGTGTTCAATGGTTCTATTATAGAAGCCATCGCTGAA
GCCAAGCAGCAGAAGAAGCTTTTTCTGGTTTATGTTTCAGGTGGCAATATGGAATCAAAC
CAATTGGACGCATCAACTTGGCTGGACCCAAGAGTTGCTGATTCTATATCAAAATACTGC
ATTTTGTTGCACATCCTAGAAGAAAGCCCTGATGCCAAAAACTTCTCAGCACTGTATCCA
CAGAAGGCCGCTCCTTGTATTACAGCTATTGGATACAATGGTGTTCAACTTTGGCAACAT
GAGGGTTTTGTTTCTGCTGATAATCTTGCATCTAGTCTTGAGAAGGCGTGGTTAAGTCTT
CATGTTCAGGAGACAACAGCTACTTTCTTGACTGCTGCACTTGCTTCAAAGAAAGAGCTT
GTATCTGGAGCTTCTTCTGTAACCTCTGAAGTAGGGAGTTCTTCAAATGCTCAAGTTTCA
CCAGTTCAGGCAGAGACACAGATACAATCTTCAATTGCTACATCGTCTAACAACAATCAG
ATAGTAGTGGAAGAGGACCGTGGACGTGCTGCTACAGAGATAGATTCCTTGGCGATTGAC
ATGGTTTCTCATGGATCAGCAGATGCTTTTGAATCCAGAGTTGGCGAGTTCAATGAGTCT
ACCGGTGCGATCACAATAGCAGAAAAGCCACTTGATCTTGTGGAGGTAGATTCAACCAAG
ACTATAGGTTCATATTCAATGTCAAAAGAGAGTCCTGATTTGCATGATCAACTCATGTAT
CCTAATGAGGAAGCTCCCGGAGAGATCGCCAAGAAGGCAAGGAAAGGTCCTGAGATAAAA
ATAGTTGAAGGTGCAGCTGCTGAGAAAGCTGATTTTTCAGATGCCTCGTCAAATAGATCT
CACGATGTTTATTTAAACATAAGATTACCTAGCGGTTCAAGTTTACAAGTGAAGTTCCTT
GTCATGAATACTTTAAGAATGGTCAAGGACTATGTTGATAAAAACCAAACAAGCAGTTTT
GGTTCTTACGATCTAGCAGTTCCTTATCCCCACAAGGTTTTTGGTGATGGAGATTTGGAT
AGAACATTGTCAGATTTGGGTTTACACAATAGACAAGCACTTATAATCGTTCGTCATAAC
AAAGTGAACGTTACACCATTGCATGGTCAAAGCAGTTCTGCTGAGAGTAACCATTCAGCA
ATTGGATTCAATGAAGGCTATTTTTCTATGATCAGAAGGCTCTTTTCATATGTGAATCCT
TTATCTTATCTTGGTGGAAGTTCCAACACATCAGACATTGCTCAGGGTTCTCAAAATAGC
ATATGGCAATATGTACTGTCTCCTCATGACATGCAGGTCCAAACCCCACACCTCAGAATA
ATCAGACGTTGGCGCGTAAGCCATACCAAACTCCTATAA

Peptide Sequence

PEP ID

XP_016512645.1
PEP Infomation

PREDICTED: plant UBX domain-containing protein 11-like isoform X3 [Nicotiana tabacum]
Sequence

MERPLSSLVFNGSIIEAIAEAKQQKKLFLVYVSGGNMESNQLDASTWLDPRVADSISKYC
ILLHILEESPDAKNFSALYPQKAAPCITAIGYNGVQLWQHEGFVSADNLASSLEKAWLSL
HVQETTATFLTAALASKKELVSGASSVTSEVGSSSNAQVSPVQAETQIQSSIATSSNNNQ
IVVEEDRGRAATEIDSLAIDMVSHGSADAFESRVGEFNESTGAITIAEKPLDLVEVDSTK
TIGSYSMSKESPDLHDQLMYPNEEAPGEIAKKARKGPEIKIVEGAAAEKADFSDASSNRS
HDVYLNIRLPSGSSLQVKFLVMNTLRMVKDYVDKNQTSSFGSYDLAVPYPHKVFGDGDLD
RTLSDLGLHNRQALIIVRHNKVNVTPLHGQSSSAESNHSAIGFNEGYFSMIRRLFSYVNP
LSYLGGSSNTSDIAQGSQNSIWQYVLSPHDMQVQTPHLRIIRRWRVSHTKLL

Transcript Sequence

Gene sequence data has not been registered.